胸腺上皮性肿瘤基因组图谱( Cancer Cell. 2018 )

已有 5221 次阅读2018-6-12 21:53 |个人分类:TET学习

The Integrated Genomic Landscape of Thymic Epithelial Tumors
文献亮点:
Multi-omics definition of four robust molecular TET subtypes associated with survival
多组学(multi-omics)定义了与生存有关的四种重要分子TET亚型
Thymomas have the lowest mutational burden among adult cancers
胸腺瘤在成人癌症中具有最低的突变负担
Enrichment of HRAS, NRAS, TP53, and recurrent GTF2I mutations are observed
观察到富集(Enrichment)HRAS,NRAS,TP53和复发GTF2I突变
Expression of autoimmune targets and aneuploidy links thymoma to myasthenia gravis
自身免疫目标和非整倍体(Aneuploidy)的表达将胸腺瘤与重症肌无力关联起来

Radovich et al. perform multi-platform analyses of thymic epithelial tumors. They identify high prevalence of GTF2I mutations and enrichment of mutations in
HRAS, NRAS, and TP53 and link overexpression of muscle autoantigens and increased aneuploidy in thymoma and patients’ risk of having myasthenia gravis.


Radovich M, Pickering CR, Felau I,et al. The Integrated Genomic Landscape of Thymic Epithelial Tumors. Cancer Cell. 2018 Feb 12;33(2):244-258.e10. doi: 10.1016/j.ccell.2018.01.003. PubMed PMID: 29438696.
Abstract

Thymic epithelial tumors (TETs) are one of the rarest adult malignancies. Among TETs, thymoma is the most predominant, characterized by a unique association with autoimmune diseases, followed by thymic carcinoma, which is less common but more clinically aggressive. Using multi-platform omics analyses on 117 TETs, we define four subtypes of these tumors defined by genomic hallmarks and an association with survival and World Health Organization histological subtype. We further demonstrate a marked prevalence of a thymoma-specific mutated oncogene, GTF2I, and explore its biological effects on multi-platform analysis. We further observe enrichment of mutations in HRAS, NRAS, and TP53. Last, we identify a molecular link between thymoma and the autoimmune disease myasthenia gravis, characterized by tumoral overexpression of muscle autoantigens, and increased aneuploidy.

KEYWORDS:

TCGA; autoimmunity; genomics; myasthenia gravis; proteomics; thymic carcinoma; thymic epithelial tumors; thymoma; transcriptomics

PMID: 29438696 DOI: 10.1016/j.ccell.2018.01.003

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